Infrastructure
Cloud deployment, containers, and DevOps documentation
83 pages
in this section.
Infrastructure Architecture Overview
Code Search Infrastructure: Zoekt vs GitNexus
Communications & Workspace Infrastructure
Container Framework
Container Services
DNS & GCP Architecture
DVC Dual-Remote Strategy
GCP Infrastructure Audit Report
GCP Project Setup
Hosting & Deployment Architecture
Cytognosis Foundation — Master Infrastructure
Cytognosis Service Account Architecture
Analysis
Cytognosis Infrastructure: On-Demand Scaling Analysis
Audits
GCP Infrastructure Audit Report
Ci cd
GitHub Actions Self-Hosted Runner Setup
Mono-Repo Best Practices for Multi-Platform Apps
OIDC / Workload Identity Federation
Self-Hosted Runner Setup (ARM64)
CI/CD — Website Deployment Pipeline
Communications
Workspace AI Features Setup
Compute
Compute Node Types & Provisioning
Data strategy
SOP: Audit Log Retention (7 Years)
SOP: BAA Inventory & Vendor HIPAA Compliance
SOP: Confidential Compute Rollout Plan
SOP: Contingency Plan (Disaster Recovery)
SOP: Deferred Security Controls
SOP: DUC IAM Provisioning Pattern
HIPAA Compliance Framework
HIPAA Compliance Status Dashboard
SOP: Incident Response Runbook
SOP: Member-Inference Evaluation Methodology
NIH Genomic Data Sharing — Operational Requirements
PHI Security Controls Checklist
SOP: Privacy Impact Assessment (PIA) Template
SOP: Risk Assessment Template
Cytognosis Central Data Hub (`cytognosis-data-hub`)
Data Infrastructure Overview
Cytognosis Data Management Plan (DMP)
Cytognosis Dataset Catalog & Stratification
DVC Configuration Guide
LinkML + Knowledge Graph Playbook
...and 15 more
Policy deployment
Organization OPA/Cedar Policy Deployment Guide
Programs
Neuroverse — Action Plan
Neuroverse — Datasets, Cohorts & Modalities
Neuroverse — Infrastructure & Data Environment
Neuroverse Program
Registries
Internal Python Package Registry (cytognosis-python)
Registry Authentication
Reproducibility
06 — Acceptance Gates and KPIs
02 — Artifact Storage: VFS + SWHID
03 — Environments and Containers
04 — Provenance and Lineage
Reproducibility & FAIR Strategy
01 — Schema Strategy
05 — FAIRDOM-SEEK + WorkflowHub Integration
Self hosted
Server Migration & Optimization Plan
Self_hosted
Bundled Infrastructure & Modular Compute Plan
Cal.com Integration Evaluation
Infrastructure Walkthrough
Research Knowledge Management Platform
MLOps & Infrastructure Architecture Evaluation
Self-Hosted Core Services Infrastructure
Extended Self-Hosting Evaluation Report
Tools
NER
External Repository Directory
Cytognosis Tools Catalog
Cytognosis Infrastructure Stack
Cytognosis Tools Master Catalog